Kinase Browser
Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.
Detailed Locus Information for CNAG_06500T0
| Species | Cryptococcus neoformans var. grubii H99 | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Gene Annotation | arginine metabolism transcriptional control protein | ||||||||||||||||||
| Gene Symbol | Unknown | ||||||||||||||||||
| Kinase Superfamily | SAICAR synthase-like | ||||||||||||||||||
| Kinase Family | Inositol polyphosphate kinase (IPK) | ||||||||||||||||||
| KEGG Linkout | KEGG::CNN02250 | ||||||||||||||||||
| Genome Browser | JBrowse link goes here. Sequence information also available from JBrowse. | ||||||||||||||||||
| Kinase Prediction | N/A | ||||||||||||||||||
| Functional Annotation |
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| Amino Acid Sequence | MDLPLTLDDHIPFSHQVAGHPGVMSDPSGSLVIKPALPREIAFYQLLSNSDPEDIVWPLRKFVPKNYGTLRLEGRIGAAGGVETDLDVQDEVPESVVLANLAYAYTRPNIMDVKLGTVLYAPYATDEKRQRMDRQARETTTYETGIRLTGCQTWHAPTQSYISTPKSFGKSITPPQLSQGMVRFFPLPTDSIPSLVTLPSPPPTAVEVVSTVAASQLPIPAQTSCASVIQSSTSIPIPPSTPISPDPAAIASIFPASTDPENSPTYENHSIPPPTLARLLTLLLQKLDQLTAVLSTLEMRFVGASLLVVYEGDPIRLEAALDREEAKVQEESEEKEKRDGERSMFSDDGSIDFSDSDADSDEDDEEEYDSDDELDGKKKDERRASKCPALTLKLIDFAHTWLAQGEGPDEGVLKGLKTFRSLVEGRLEEVERGCV | ||||||||||||||||||
Expression Data
| Notation | Condition | Normalized Raw Expression |
|---|---|---|
| A | YPD 30°C, concentration: 2x 10^8 cells/ml | 526 |
| B | YPD 30°C, concentration: 5x10^7 cells/ml | 1360 |
| C | YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml | 1118 |
| D | YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml | 1296 |
| E | YPD 37°C, concentration: 5x10^7 cells/ml | 1294 |
| F | YP+galactose 30°C, concentration: 2x10^8 cells/ml | 552 |
Gene Disruption Strategy
| Primer Name | Description | Primer Sequence |
|---|---|---|
| L1 | CNAG_06500 5' flanking region primer 1 | GATACAGCGGGCAAAAAG |
| L2 | CNAG_06500 5' flanking region primer 2 | TCACTGGCCGTCGTTTTACAGAATGGGATGTGGTCGTC |
| R1 | CNAG_06500 3' flanking region primer 1 | CATGGTCATAGCTGTTTCCTGTGAACGGGGTTGTGTTTG |
| R2 | CNAG_06500 3' flanking region primer 2 | ATACAGACACTCCGATGCG |
| SO | CNAG_06500 diagnostic screening primer, pairing with B79 | ATAAAGAGGGTTTGGGGC |
| PO | CNAG_06500 Southern blot probe primer | ATCGCATTTCAAGGGTGG |
| STM | NAT#225 STM primer | CCATAGAACTAGCTAAAGCA |
| STM common | STM common primer | GCATGCCCTGCCCCTAAGAATTCG |