Kinase Browser
Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.
Detailed Locus Information for CNAG_01704T0
| Species | Cryptococcus neoformans var. grubii H99 | |||||||||
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| Gene Annotation | serine/threonine protein kinase | |||||||||
| Gene Symbol | IRK6 | |||||||||
| Kinase Superfamily | Sm-like ribonucleoproteins | |||||||||
| Kinase Family | Mechanosensitive channel protein MscS (YggB), middle domain | |||||||||
| KEGG Linkout | KEGG::CNC02120 | |||||||||
| Genome Browser | JBrowse link goes here. Sequence information also available from JBrowse. | |||||||||
| Kinase Prediction | N/A | |||||||||
| Functional Annotation |
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| Amino Acid Sequence | MSDDSATGRQDNFNYPVQTGHTVNLVPRSQAQERETHPELQGINRNYLGSDPNSGHIRDQSLDVPESEGYGMTDIPHHSSRSPLTPPEANTSYTGASTPNRVHYPPSPLMPHAQPHGDAYTTIPLQDDYNNAPASGSATPHSGSMNKRKWSFLPGNRSSASLEKSTVDEKGAKRRPKNQRGTSWDLLGDRGEWEEFSPKNASVENLRFAEGDVGTNKFSRLYYWALNKGIVVRWAMYIIPVLILFWIPGIIFYAGLRDAKVWTVTLNWWSIWLTIIWLTFWGSTAAFMMLPHIWRNTIAVVIPSAKPLTDIIAALGRYAKLTIWCLAIWVSFTPLIVNHYTGDESATSRSDLSTFANLLFGLFLCSIVYCVEKLLIQLIALQFHRDSYEDRLQEQKFSLKALTYLYTNSHDIPGRSDTLTDAMSIKTKGSQMPKVALRKALKGLKEAAQTTTTALGNVASEMAGQSVLQTNSPANKVTMALTSANKSKALARRLFYSFRAPGAAHLDIQDVVQYFPNLETAQAAFVIFDKDGNGDATRDEIESAVLGIHRERLALEASMRDLDGAVRRLDDIFMVIVIAIAVLILASMITNKITTFVTSAGTFILGLSWLIGTTMQEVLGACIFLFVKHPFDVGDRVDIDGVQYTVAKMQLLSSSFKRVDGKYVWIGHNVLTTKIIENIRRSGAISEEFAFEVAFDTSFEALQALRSRMIAFLKENSRDFLPVFDVTVDDMPAQGKLVLKADIRYKSNWQQVSLKIQRRNKWICALKMALADLKIFGPDGAGNPSPEEAGPTQYTLVPWEECRPRISEESTAPPPPFTSAAPSPPPLMDARAAVNDPYGDIWNEGDELLAFQSADPSRPGTPGPGSAMRQRQPQVPQHQDVLEMSEVAVDAKRQP | |||||||||
Expression Data
| Notation | Condition | Normalized Raw Expression |
|---|---|---|
| A | YPD 30°C, concentration: 2x 10^8 cells/ml | 20365 |
| B | YPD 30°C, concentration: 5x10^7 cells/ml | 15716 |
| C | YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml | 18585 |
| D | YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml | 21227 |
| E | YPD 37°C, concentration: 5x10^7 cells/ml | 19311 |
| F | YP+galactose 30°C, concentration: 2x10^8 cells/ml | 12707 |
Gene Disruption Strategy
| Primer Name | Description | Primer Sequence |
|---|---|---|
| L1 | CNAG_01704 5' flanking region primer 1 | GGTCAACTTTCCCTTGTCG |
| L2 | CNAG_01704 5' flanking region primer 2 | TCACTGGCCGTCGTTTTACTTGAGAGAGCGTGATAAAGC |
| R1 | CNAG_01704 3' flanking region primer 1 | CATGGTCATAGCTGTTTCCTGGCACATTGACCTTCCTGTAAC |
| R2 | CNAG_01704 3' flanking region primer 2 | GCCCTAAACAAACTAACTCTGTCC |
| SO | CNAG_01704 diagnostic screening primer, pairing with B79 | AGCCTCCTCTTTCCTTACAG |
| PO | CNAG_01704 Southern blot probe primer | GCTGGTGCCTCTTTGATTC |
| STM | NAT#5 STM primer | TGCTAGAGGGCGGGAGAGTT |
| STM common | STM common primer | GCATGCCCTGCCCCTAAGAATTCG |
Phenotype Assays
| Growth | |
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| Mating Data | |
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| Virulence Factor Production | |
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Capsule
Urease
Melanin
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| Stress Response and Adaptation | |
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Osmotic Stress
Oxidative Stress
Heavy Metal Stress
Cell Wall Stress
ER Stress
Genotoxic Stress
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| Antifungal Drug Susceptibility | |
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| Virulence Data by the Insect Host Model (Galleria mellonella) | |
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| Lung Infectivity Data by the Signature-tag Mutagenesis-based Murine Host Model | |
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