Kinase Browser
Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.
Detailed Locus Information for CNAG_01845T0
| Species | Cryptococcus neoformans var. grubii H99 | ||||||||||||||||||
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| Gene Annotation | AGC/PKC protein kinase | ||||||||||||||||||
| Gene Symbol | Unknown | ||||||||||||||||||
| Kinase Superfamily | Cysteine-rich domain | ||||||||||||||||||
| Kinase Family | Protein kinase cysteine-rich domain (cys2, phorbol-binding domain) | ||||||||||||||||||
| KEGG Linkout | KEGG::CNC03300 | ||||||||||||||||||
| Genome Browser | JBrowse link goes here. Sequence information also available from JBrowse. | ||||||||||||||||||
| Kinase Prediction |
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| Functional Annotation |
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| Amino Acid Sequence | MASNDPKAKVILQSIATEKRNIEGARAVIRAFEASSKNETVIQQAQNEIRTATMSIKFLEDELAKLQVDGSGASSGTPGRGEPSGRAGAGVPGRQGPQGIATTSPGGRGMAGDRERPLPPPPPGAEQDNAKKPETKNYSQLDLLRYDAPLTGAKITRMLNQLQFKLQVEEQYRTGIEKMAQAYRAEGDKRLKSETDAKKSESEGKIQLLRKAKKRYESLAKFGGAVEDDEDLMSDGKRKEALRKPISGKLVISLRSARDLNHRTLPRRSSKTYSETTVIIKVEGNERAVSHPSRNDKWHEDFHIPVEKANEVEITIYDTVAPGDSAPIGMLWLRVSDLVEALRRQKVGIEGQGAGWVTAATAATMGPRSSGNAPDSVTLHSAGTLRGRPDAEGKGPDGIDGWWSVEPAGAISLRMDFVKDTVAGARRPYEALGRQGAVRMRKGDVYEMNGHKFVQRQFYQPIMCALCQEFLLTGEGYQCEDCRYACHKKCYPKVVTKCISKSNADGEGDEEKINHRIPHRFTSYTNMSANWCCHCGYMLPFGRKNAVKCSECALTCHQTCSHLVPDFCGMTMEMANLLLKNLRDIKTTQHRKPVPSTSTSSSVSTLPSYHSQEARSHPVQSAAPQQPALSPHPPAGTLPSADQRPIQPQAQNQQTGAYDNLRPAGGRAMPQLPPVAVPSSKISFEGERPQEPHAQIHPVMPSAQPQPQTLPPSAQSVQPPVKPHYVPQPPVQQQVTQRLPPQQPVMTRKRKVGLDDFNFLAVLGKGNFGKVMLAEEKTSSNLYAIKVLKKEFIIENDEVESTQSEKRVFLAAAQERHPFLLGLHSCFQTETRVYFVMEYISGGDLMLHIQKKQFTLRQAKFYACEVLLALQYFHSKGIIYRDLKLDNILLTLDGHVKVADYGLCKEEMWFGKTTSTFCGTPEFMAPEILLEQRYGRAVDWWAFGVLTYEMLLGQSPFRGEDEDEIFDAILEDEPLYPITMPRDAVSLLQRLLTRDPTRRLGAGEGDAEEIKQHLFFRDVNFDDVYHKRIPPPYFPVIGNATDTSNFDQEFTREQPTLTPVHTQLSEADQKEFAGFSWIAPWAAAQA | ||||||||||||||||||
Expression Data
| Notation | Condition | Normalized Raw Expression |
|---|---|---|
| A | YPD 30°C, concentration: 2x 10^8 cells/ml | 16909 |
| B | YPD 30°C, concentration: 5x10^7 cells/ml | 19415 |
| C | YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml | 21056 |
| D | YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml | 15866 |
| E | YPD 37°C, concentration: 5x10^7 cells/ml | 14400 |
| F | YP+galactose 30°C, concentration: 2x10^8 cells/ml | 15953 |
Gene Disruption Strategy
| Primer Name | Description | Primer Sequence |
|---|---|---|
| L1 | CNAG_01845 5' flanking region primer 1 | GAATAATCAGCAGCGGTG |
| L2 | CNAG_01845 5' flanking region primer 2 | TCACTGGCCGTCGTTTTACGTTCGTTGTTGGTTGTCG |
| R1 | CNAG_01845 3' flanking region primer 1 | CATGGTCATAGCTGTTTCCTGGGGAGCCAATAATGTGGAG |
| R2 | CNAG_01845 3' flanking region primer 2 | TCTTCATCCTTCCCTTGC |
| SO | CNAG_01845 diagnostic screening primer, pairing with B79 | TAAGGGCAAAAGGGTCAG |
| PO | CNAG_01845 Southern blot probe primer | TTTTTAGCGTCCGTCTCG |
| STM | NAT#205 STM primer | TATCCCCCTCTCCGCTCTCTAGCA |
| STM common | STM common primer | GCATGCCCTGCCCCTAAGAATTCG |