Kinase Browser
Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.
Detailed Locus Information for CNAG_02459T0
| Species | Cryptococcus neoformans var. grubii H99 | ||||||||||||||||||
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| Gene Annotation | Atypical/ABC1/ABC1-A protein kinase | ||||||||||||||||||
| Gene Symbol | Unknown | ||||||||||||||||||
| Kinase Superfamily | Protein kinase-like (PK-like) | ||||||||||||||||||
| Kinase Family | Protein kinases, catalytic subunit | ||||||||||||||||||
| KEGG Linkout | KEGG::CNE00990 | ||||||||||||||||||
| Genome Browser | JBrowse link goes here. Sequence information also available from JBrowse. | ||||||||||||||||||
| Kinase Prediction |
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| Functional Annotation |
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| Amino Acid Sequence | MHTTMLSAALRVLARSAAIQRGEAGTAAATATTAAPPPLSRAAALDRLINAAPHLPPPPAPGTHPADKGHGIPLPLSLKAGHRGPVRYVQPESRPTPNAGPSTSARPPEPARPAKPVRPANTMEPAKTVDADKPPQPVPPIVQELDAGPGIKNHPVEPLITLPEDEETPVILRASRVPASRLGRLFHYGSLAASLSWGAASESIRRSTAGNGGEKSGGSVFMSDANIRRLVSTLGRMRGAALKLGQFMSIQDNHMLPPEIEQVLHQVQAHANYMPDWQMDKVLRDELGADWQANLFTQFDRTPIASASIGQVHRAILKDGRQVAVKIQFPGVASSIESDLSNLSLLLRTSALLPKGLYLQNTIAVMRRELEDECDYIREAAAGKKFAHLLAGDTFFVVPQVIDEATTGKVLTTEWMDGKPLSRVKNLSQETRDLIGTNILRLCLRELFQFRFMQTDPNWANFLFSPSSPSPSPSSSPQIQLIDFGASREYTKEFMDGWYRLLKSALEGDRERMRVESLNLGYLTGEENDEMVQAHLDSMALVASPFSHHGPYPFAKQTITESIRALIPIMLKHRLTPPPQETYSLNRKLSGAFLMCAKMRANVDCKKLWEEEVGGYKEG | ||||||||||||||||||
Expression Data
| Notation | Condition | Normalized Raw Expression |
|---|---|---|
| A | YPD 30°C, concentration: 2x 10^8 cells/ml | 6730 |
| B | YPD 30°C, concentration: 5x10^7 cells/ml | 9639 |
| C | YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml | 9172 |
| D | YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml | 6815 |
| E | YPD 37°C, concentration: 5x10^7 cells/ml | 5756 |
| F | YP+galactose 30°C, concentration: 2x10^8 cells/ml | 6565 |
Gene Disruption Strategy
| Primer Name | Description | Primer Sequence |
|---|---|---|
| L1 | CNAG_02459 5' flanking region primer 1 | TTGGGAGGGAGTTTACCGTG |
| L2 | CNAG_02459 5' flanking region primer 2 | TCACTGGCCGTCGTTTTACGCTGCGTTTATGAGTCTGTC |
| R1 | CNAG_02459 3' flanking region primer 1 | CATGGTCATAGCTGTTTCCTGAACTCCACCCCTCTTACCTC |
| R2 | CNAG_02459 3' flanking region primer 2 | GCCACTTCCGTATCAAAAG |
| SO | CNAG_02459 diagnostic screening primer, pairing with B79 | CCTCCTATCCAACAACAACAG |
| PO | CNAG_02459 Southern blot probe primer | ATAGATTCTGATGCGGCG |
| STM | NAT#122 STM primer | ACAGCTCCAAACCTCGCTAAACAG |
| STM common | STM common primer | GCATGCCCTGCCCCTAAGAATTCG |