Kinase Browser
Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.
Detailed Locus Information for CNAG_02787T0
| Species | Cryptococcus neoformans var. grubii H99 | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Gene Annotation | dephospho-CoA kinase | ||||||||||||||||||
| Gene Symbol | Unknown | ||||||||||||||||||
| Kinase Superfamily | P-loop containing nucleoside triphosphate hydrolases | ||||||||||||||||||
| Kinase Family | Nucleotide and nucleoside kinases | ||||||||||||||||||
| KEGG Linkout | KEGG::CNC04050 | ||||||||||||||||||
| Genome Browser | JBrowse link goes here. Sequence information also available from JBrowse. | ||||||||||||||||||
| Kinase Prediction | N/A | ||||||||||||||||||
| Functional Annotation |
|
||||||||||||||||||
| Amino Acid Sequence | MLIVGLTGGIASGKSTVSKLLSERHHLPIIDADLIAREVIEPGTSGYSLVVTHFGPDRILQEDGVSLDRGAIGDIIFHDPEERKWLNGVVHPRVKKEMVKRIIRYWLKGEWCVIVDVPLLIEAGMWKWVGDTVVVYVNERLQLSRLLSRQSNPPLTQSQASSRIASQLPLSAKLSYATSVIDNSGSFSDLNDQVDRTVAKWKAQQGGDSGWWWRVCWLVPPVGLVAGALSLLAIWRKSKKDRRRGRGEVSRRDGSEQAPERIELMELKGRRRRATNGSSVTDKE | ||||||||||||||||||
Expression Data
| Notation | Condition | Normalized Raw Expression |
|---|---|---|
| A | YPD 30°C, concentration: 2x 10^8 cells/ml | 2818 |
| B | YPD 30°C, concentration: 5x10^7 cells/ml | 4388 |
| C | YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml | 3918 |
| D | YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml | 4038 |
| E | YPD 37°C, concentration: 5x10^7 cells/ml | 2633 |
| F | YP+galactose 30°C, concentration: 2x10^8 cells/ml | 2594 |
Gene Disruption Strategy
| Primer Name | Description | Primer Sequence |
|---|---|---|
| L1 | CNAG_02787 5' flanking region primer 1 | AACCCCTTGTGTCCCCAAAC |
| L2 | CNAG_02787 5' flanking region primer 2 | TCACTGGCCGTCGTTTTACTGAGCAGGCGGATACGATAC |
| R1 | CNAG_02787 3' flanking region primer 1 | ATGGTCATAGCTGTTTCCTGGCAAAAAGGACAGAAGAAGAGG |
| R2 | CNAG_02787 3' flanking region primer 2 | TTCTCCCATTTCTCCACCC |
| SO | CNAG_02787 diagnostic screening primer, pairing with B79 | AGCAGAGCCAGATGGTAGAG |
| PO | CNAG_02787 Southern blot probe primer | TTCCACTTGGCAACTGTCC |
| STM | NAT#227 STM primer | TCGTGGTTTAGAGGGAGCGC |
| STM common | STM common primer | GCATGCCCTGCCCCTAAGAATTCG |
