Kinase Browser
Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.
Detailed Locus Information for CNAG_02866T0
| Species | Cryptococcus neoformans var. grubii H99 | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Gene Annotation | pantothenate kinase | ||||||||||||||||||
| Gene Symbol | Unknown | ||||||||||||||||||
| Kinase Superfamily | Actin-like ATPase domain | ||||||||||||||||||
| Kinase Family | Fumble-like | ||||||||||||||||||
| KEGG Linkout | KEGG::CNC04810 | ||||||||||||||||||
| Genome Browser | JBrowse link goes here. Sequence information also available from JBrowse. | ||||||||||||||||||
| Kinase Prediction | N/A | ||||||||||||||||||
| Functional Annotation |
|
||||||||||||||||||
| Amino Acid Sequence | MPAQSSMPDISIPQARRIVVDTTGAQIVQEESPATRDSRGIYLPHYTEPVSHIAIDVGGSLAKVVYFTRSNLPIPATPSSSGTSSPFLPPSQSVSQPTAIVSEGSPMPSYFPRDSPTLNPHSHAPFDPSPAEQRRPTVNGALTPATLSEDNSAIPLPAKNKHKSRNSIHNPLPPPLPGGLLNFARFETDNIDELIIFLQDLISSSATANRVSLEKMKRNVKVMATGGGAHKYYDRLADELGVEVHREEEMECLIRGLGFVTRVPEEVFYFSEELVYKVSHAGSTSEQTLTIPASELPRPSPMPPAYQVTFAPTPSDDDPVPHFPCLVVNIGSGVSIVKVDEDGSFERVSGTSLGGGTLWGLLSLLTDAESFDEMLLLSEKGDNSAVDMLVGDIYGSDYNKIGLKSSTIASSFGKVFKKGSNAERRKRFKQEDIAKSLLYAISNNIGHVAYMNAAKYGLDKVFFGGCFIRGHAATISTLSYAIRFWSKGTMTACFLRHEGFLGAIGAWIKNVGELDENGSPLQKHSD | ||||||||||||||||||
Expression Data
| Notation | Condition | Normalized Raw Expression |
|---|---|---|
| A | YPD 30°C, concentration: 2x 10^8 cells/ml | 4131 |
| B | YPD 30°C, concentration: 5x10^7 cells/ml | 5623 |
| C | YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml | 6068 |
| D | YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml | 4494 |
| E | YPD 37°C, concentration: 5x10^7 cells/ml | 4474 |
| F | YP+galactose 30°C, concentration: 2x10^8 cells/ml | 3299 |
Gene Disruption Strategy
| Primer Name | Description | Primer Sequence |
|---|---|---|
| L1 | CNAG_02866 5' flanking region primer 1 | GAAGATAGTCAATCCGCAAG |
| L2 | CNAG_02866 5' flanking region primer 2 | TCACTGGCCGTCGTTTTACATCTACCACTATTCTCCTGGC |
| R1 | CNAG_02866 3' flanking region primer 1 | CATGGTCATAGCTGTTTCCTGGCTGATTGTTCTTGACATTCCG |
| R2 | CNAG_02866 3' flanking region primer 2 | AAGGAGGATGAAGGAAGGC |
| SO | CNAG_02866 diagnostic screening primer, pairing with B79 | ACAGGAACCTCCGTAACAG |
| PO | CNAG_02866 Southern blot probe primer | ATTGGTGAAGGTCTGGGCAGTTCG |
| STM | NAT#102 STM primer | CCATAGCGATATCTACCCCAATCT |
| STM common | STM common primer | GCATGCCCTGCCCCTAAGAATTCG |